Insertion junction: CLIP2.066061_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066061
Chromosome:chromosome 2
Location:1177343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081300 (1 of 13) IPR000086//IPR015797 - NUDIX hydrolase domain // NUDIX hydrolase domain-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTGACGTGTGGGGCCTCACCGCCACGATCTGCATTGCGGCGGCACGC
Internal bar code:GCCGCATCAGTCTACGGTAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2052
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TACTCAGCCCGTCTAGCACT
Suggested primer 2:AGTGTTCCTGGGCACATACG