Insertion junction: CLIP2.066067_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066067
Chromosome:chromosome 12
Location:2276726
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508350 TPR2,TPR11 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat; Tetratricopeptide-repeat protein 11 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGCTTGGCTGGTCTCCTGGTCGCTTTGCATCTTCCAGGGGTAGGCCG
Internal bar code:GGGCCTATAGGCGGGCGGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1611
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGCCGGACAGTACAAGA
Suggested primer 2:CAGTCTGAGCTGTGGGAGTG