Insertion junction: CLIP2.066073_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066073
Chromosome:chromosome 10
Location:6377844
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g464200 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain 5'UTR
Cre10.g464250 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCTAATCAACCGCGAACAGACGGCCCCTTTTCGCCTTCGCCCACGTT
Internal bar code:ATCAATACAGAGCTGCTTCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2233
LEAP-Seq percent confirming:1.63934
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:60
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGGAAGCAGCTGCAAGG
Suggested primer 2:TGGGAATGGGAGGCAGGATA