Insertion junction: CLIP2.066086_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066086
Chromosome:chromosome 12
Location:3394657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497900 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold 3'UTR
Cre12.g497950 (1 of 1) PTHR10706 - F-BOX FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATTAACCCTGCCCGACCCTGCCCCCACCACTGCGCTACACAACAATC
Internal bar code:TCCTACCAGGAAACCCGGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4891
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGGCTAGTGGCTACCA
Suggested primer 2:CTGGTCCATACGCCTCGTAC