Insertion junction: CLIP2.066091_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066091
Chromosome:chromosome 17
Location:4094844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728864 OPR105 (1 of 781) IPR000104 - Antifreeze protein, type I; OctotricoPeptide Repeat protein 105 3'UTR
Cre17.g728900 FSA1,TAL3 (1 of 1) PTHR10683//PTHR10683:SF2 - TRANSALDOLASE // SUBFAMILY NOT NAMED; Transaldolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCGAGAATCTCCAGAGTCAGAGCACAGAAACCTTTGTGTTCCACACAA
Internal bar code:TACGGGACGTTGGAATCCCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2464
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCTGCCTGTGTTTGTTG
Suggested primer 2:TTGGGTTGGTTGAGGTGCTT