Insertion junction: CLIP2.066093_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066093
Chromosome:chromosome 2
Location:2851685
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094700 5'UTR/5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCAAGGCCGAAAAGCGCAGACAATTAGCCCAGCGATGAGCGCAGAAC
Internal bar code:CTGCCGTCCATGGCGGGAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1815
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTCCAACCTCTGCTTCGA
Suggested primer 2:GCACGTGCACCATGATGATC