Insertion junction: CLIP2.066100_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066100
Chromosome:chromosome 10
Location:3429687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444150 (1 of 2) IPR007743//IPR027417//IPR030385 - Immunity-related GTPases-like // P-loop containing nucleoside triphosphate hydrolase // IRG-type guanine nucleotide-binding (G) domain 3'UTR
Cre10.g444216 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGACGACCTCCACGTGGGCAAAGCACGTCGAAACATCGTAACAAACA
Internal bar code:TAATGCCGGAAGGATCCCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1024
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTCATTATGCTGCTGCC
Suggested primer 2:CGACCCGGTTCTCAACAAGA