Insertion junction: CLIP2.066105_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066105
Chromosome:chromosome 3
Location:933721
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146627 (1 of 1) PTHR20852:SF16 - TYPE-1 GLUTAMINE SYNTHETASE 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGAAGCTGCGTGTGAGCTGCGTGTTAAGTAAGATGAGATAGAGACGC
Internal bar code:CTTCGTGTAAGGTTGGCGGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2726
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCAACAACCGTGTGTCAC
Suggested primer 2:GTGAGAGGTTGGACTGTGGG