Insertion junction: CLIP2.066107_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066107
Chromosome:chromosome 3
Location:427659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144887 (1 of 1) IPR000048//IPR003590//IPR006553 - IQ motif, EF-hand binding site // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGGCACATGGAAGGCAAGCAGAATTGCACAAGCCCACAGTACGAGCTC
Internal bar code:GGCTGCCGCAACGACATGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1177
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCCACGCCTCTCAACAC
Suggested primer 2:TGAGTGACGTGGTGATGTGG