Insertion junction: CLIP2.066107_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066107
Chromosome:chromosome 12
Location:3968087
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g515550 VPS33 SM/Sec1-family protein; (1 of 1) PTHR11679//PTHR11679:SF1 - VESICLE PROTEIN SORTING-ASSOCIATED // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 33B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACACACACACACACACGCACACACACACACACACACACACACAC
Internal bar code:TTTCAATTGGGAACTACTCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:919
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGGTGACCTCGTCTATGA
Suggested primer 2:CGCGCTAACATGTTCCTTCG