Insertion junction: CLIP2.066108_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066108
Chromosome:chromosome 3
Location:1940570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155200 CHM1 Chorismate mutase; (1 of 1) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAGGATAGGGGGACTGCCCGCCTGCCAGCTAAGCCTTCTGACAGGGAG
Internal bar code:AAATTATTTCCTGGAGTGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1949
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCGCTATAAGGGCCAGTC
Suggested primer 2:TAATCCCAGAGCTAAGCGCG