Insertion junction: CLIP2.066109_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066109
Chromosome:chromosome 5
Location:2763173
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g240750 TEF17 Predicted protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCCCAGGCATAAACTCAGGCAGCGCGCCTGTCCCCACCTGCCACCAC
Internal bar code:GGGTCGGCGGATTGCACCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:460
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTCATGTGGTGTCATGT
Suggested primer 2:CGGCGCTGTTCTGCTATTTC