Insertion junction: CLIP2.066120_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066120
Chromosome:chromosome 10
Location:5225277
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456100 FAP142,POC21,AGG3 (1 of 4) K03809 - NAD(P)H dehydrogenase (quinone) (wrbA); Aggregation 3 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGAAACAAAGTGCCATCCCCCGTGCCCGAAATCCCCCGGGCCCCCCTT
Internal bar code:TATGCAGTCCTGCGAATGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1352
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGTGTGTTCCCAAGGCG
Suggested primer 2:TGCGCGCGTTCTAATTAAGC