Insertion junction: CLIP2.066122_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066122
Chromosome:chromosome 2
Location:5902077
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117600 5'UTR
Cre02.g117650 GT90F2,GT90-2 (1 of 4) PTHR12203//PTHR12203:SF35 - KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // SUBFAMILY NOT NAMED; Glycosyltransferase GT90 family protein 2 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCAGCCTGCCGCGACATGCAAGGACAAGCAAGGCGCAAATAAAGGTG
Internal bar code:AATAGCCCTGTTTTAGCTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:225
LEAP-Seq percent confirming:1.83486
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:107
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:TGACTGGCTTCACGTACCAC
Suggested primer 2:AGTCGCAGTAACCGAAGTGG