Insertion junction: CLIP2.066124_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066124
Chromosome:chromosome 2
Location:5387719
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113652 (1 of 2) PTHR24320:SF1 - 3-KETODIHYDROSPHINGOSINE REDUCTASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATTTGAATGTCAGGCATGGCAAGGCTGTGGAAGTGCCGACATCTTGT
Internal bar code:CGGATCATGGTGACTTGGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3264
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGCATTACAACGATGGG
Suggested primer 2:GCTGCGATCGGTGTGTTTTT