Insertion junction: CLIP2.066124_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066124
Chromosome:chromosome 2
Location:5387766
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113652 (1 of 2) PTHR24320:SF1 - 3-KETODIHYDROSPHINGOSINE REDUCTASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCAATCCAGCTGTAGGGGCATGCCGCACCCCAATGACGCTGTACAGC
Internal bar code:TGGCGTGGAGCCCATTATTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1802
LEAP-Seq percent confirming:96.9388
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCGATCGGTGTGTTTTT
Suggested primer 2:CGCTGCATTACAACGATGGG