Insertion junction: CLIP2.066130_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066130
Chromosome:chromosome 12
Location:6090442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535019 (1 of 139) IPR029787 - Nucleotide cyclase 3'UTR
Cre12.g535050 (1 of 8) PF00211//PF01547 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGTTGGATGGTCAGCCGAGGAGTCTCTCGTGGGAGTCTCTGTGAGTA
Internal bar code:TATGCATGGGAGTGTGGGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3877
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCACGCACATAGCAGAA
Suggested primer 2:GTTGGTACGGGGCGCATATA