Insertion junction: CLIP2.066130_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066130
Chromosome:chromosome 12
Location:6090447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535019 (1 of 139) IPR029787 - Nucleotide cyclase 3'UTR
Cre12.g535050 (1 of 8) PF00211//PF01547 - Adenylate and Guanylate cyclase catalytic domain (Guanylate_cyc) // Bacterial extracellular solute-binding protein (SBP_bac_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCAAATGAAACAGCCTGCTGCGTGATCCAATTCTTGCAGGCTCAGCG
Internal bar code:TATGCATGGGAGTGTGGGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1303
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGTACGGGGCGCATATA
Suggested primer 2:ACACCACGCACATAGCAGAA