Insertion junction: CLIP2.066137_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066137
Chromosome:chromosome 6
Location:2347735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g267750 (1 of 1) PF00050//PF00089 - Kazal-type serine protease inhibitor domain (Kazal_1) // Trypsin (Trypsin) 3'UTR
Cre06.g267800 MML1,MITC8,MCP8 (1 of 1) K15119 - solute carrier family 25, member 39/40 (SLC25A39_40); MTM-Like Mn transporter 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGATGTAACGAATGCGTAGTTGTCCGGCGGCCTGTATTACAGACTGGGC
Internal bar code:TTATAGGGCTGGTCGCTCAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:4134
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGATTTTCTTGTCGGACG
Suggested primer 2:AGCCAGCTATGAGGTCCTCA