Insertion junction: CLIP2.066142_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066142
Chromosome:chromosome 9
Location:1529722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399350 FAP199 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGATGTTGAGGGGCACGGGCTCGGGCGGGTAGCCTAAACACAGCACCA
Internal bar code:GGAACTGTATGAGTTTTGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1944
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGAGGGCATGGAGGATG
Suggested primer 2:CGCTCCAGTGCACCGTATAT