Insertion junction: CLIP2.066144_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066144
Chromosome:chromosome 1
Location:1955922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010816 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCTACATGCAAACCCAGGGGCAAGGCCGGACCAAAGGGACAGCCACA
Internal bar code:TATCACTGTCATGGTTTGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1931
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCATGTGTGTTGGGGTTG
Suggested primer 2:CACTGTCTTTGCGCTTTGCT