Insertion junction: CLIP2.066144_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066144
Chromosome:chromosome 1
Location:1955928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010816 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAGTGCAAGTTGGTCCGGCGAGCCCCGAGGTTGTTGCGTAGGCGCGT
Internal bar code:TGATCCATAAACCCCGGAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:532
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGTCTTTGCGCTTTGCT
Suggested primer 2:CTGCATGTGTGTTGGGGTTG