Insertion junction: CLIP2.066152_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066152
Chromosome:chromosome 8
Location:1462522
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364700 (1 of 7) PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCCCTGCTTGCCTTCAACCAAAATTTGTGCTCAAGCGGCGCTGGGCT
Internal bar code:TCCGCCGTGATTCATGGCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2900
LEAP-Seq percent confirming:93.9024
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCACGCTAGAAGCTTGT
Suggested primer 2:TGATACAGCTGGAGTCCCGA