Insertion junction: CLIP2.066155_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066155
Chromosome:chromosome 6
Location:3077085
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275100 Nucleolin; (1 of 1) K11294 - nucleolin (NCL, NSR1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCGAGCCCATTGGTGTCCCACTGGAACACAGCATCTTAAGGGACAGA
Internal bar code:CGCTATTCCATGCGCGGAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:617
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCGCTAATGACGGGATGC
Suggested primer 2:ATGTGGTGGTGGGTTGTGTT