Insertion junction: CLIP2.066162_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066162
Chromosome:chromosome 6
Location:3900306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278189 (1 of 11) PF00999 - Sodium/hydrogen exchanger family (Na_H_Exchanger) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCTTAGACAAGATGTACATGCATCTTGAAAGGTTATGCTGGCTTGGT
Internal bar code:TCCGTGATGGAGGTACCCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1156
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGGCAGCATGGTTTTGA
Suggested primer 2:CAGGTCCCCTTCAGGTGTTC