Insertion junction: CLIP2.066166_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066166
Chromosome:chromosome 7
Location:3869138
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339000 CrRbcXIIb,RBCX2B RuBisCO chaperone; (1 of 2) PTHR33791//PTHR33791:SF1 - FAMILY NOT NAMED // CHAPERONIN-LIKE RBCX PROTEIN 3'UTR
Cre07.g339050 NSG11 Cofilin/tropomyosin-type actin-binding protein; (1 of 1) K05765 - cofilin (CFL) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAAAGTATAAGATGTAAGAGTCTCAGGGGTAGGCATCAGCATTGAAAA
Internal bar code:AAACCAAGTGACCGCGTAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:894
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTAGCAGCAGCAGCAATG
Suggested primer 2:CTGCACCCAAACTGCCATTC