Insertion junction: CLIP2.066169_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066169
Chromosome:chromosome 5
Location:276474
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g243351 (1 of 3) IPR000477//IPR002156//IPR012337 - Reverse transcriptase domain // Ribonuclease H domain // Ribonuclease H-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCAGCGGTTCGCAATGCCGCAGTCTGGCACTTCGATTCCGCACCAGCC
Internal bar code:ACGTTAATTGTCTTGGAAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1066
LEAP-Seq percent confirming:13.1579
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCCAGAGAGTCCATAACC
Suggested primer 2:GGGCTCAACCATAGCAACCT