Insertion junction: CLIP2.066173_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066173
Chromosome:chromosome 8
Location:2481700
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g372300 (1 of 1) IPR000104//IPR000620 - Antifreeze protein, type I // EamA domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGGTTGAGTTGCATCGTCCGGATACGGTGCCAAGCAGCAGGCGACCC
Internal bar code:TGTTCGAGGGTGTGTATTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2450
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGGTAGACGGACAATCGC
Suggested primer 2:CGTGGGGTTAATGTGGGTGA