Insertion junction: CLIP2.066182_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066182
Chromosome:chromosome 7
Location:4639605
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g344600 PGD1,PGDH1 (1 of 1) PTHR10996:SF159 - D-3-PHOSPHOGLYCERATE DEHYDROGENASE; D-3-phosphoglycerate dehydrogenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCGAGCCCACCTGCAGCGGGGTGTGTGCGTGCGACGACGTGTGTTAG
Internal bar code:CTGTAGAAGCGGATATACGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:518
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGTGCGGGTGTGTGTTA
Suggested primer 2:TTTGTTGGTAACTGTGCGCG