Insertion junction: CLIP2.066211_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066211
Chromosome:chromosome 2
Location:3998124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102750 (1 of 2) PTHR31646:SF1 - ALPHA-1,2-MANNOSYLTRANSFERASE MNN2 3'UTR
Cre02.g102776 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGACTTTCGACGTATGGAAGGATGGCCCCGGCCGGGCCGACCATGCAT
Internal bar code:AGTTGTCTCGAAGGAAATTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1959
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CCATTAAGCTCGCATGGTGC
Suggested primer 2:ACTTCTACTGGTGTGTGCGG