Insertion junction: CLIP2.066220_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066220
Chromosome:chromosome 15
Location:1368429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g641250 CNE1 (1 of 1) PTHR23056//PTHR23056:SF48 - CALCINEURIN B // SUBFAMILY NOT NAMED; Calcineurin-like phosphoesterase family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCACTTGGCTTACCCAGCCACACACAGCGCCGCCTGGTGCAATCTC
Internal bar code:CCACGGCAGTATAGGAAGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:290
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCCCCCTTTCCATTCCC
Suggested primer 2:AATGAACTCCCGACGTTCCC