Insertion junction: CLIP2.066221_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066221
Chromosome:chromosome 9
Location:49201
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g386143 (1 of 2) 1.14.11.4 - Procollagen-lysine 5-dioxygenase / Procollagen-lysine,2-oxoglutarate 5-dioxygenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGCCAACTGCTGGCCGCCCGAGATCGGGCCCTGGTGCGAGTCCATGGG
Internal bar code:CCACCGGAAAAAGGTCATGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:440
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTGGACCAGTTGTACTG
Suggested primer 2:ATGCGAAATCGATGTGTGCG