Insertion junction: CLIP2.066229_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.066229
Chromosome:chromosome 10
Location:3874936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446250 (1 of 1) K13339 - peroxin-6 (PEX6, PXAAA1) 3'UTR
Cre10.g446275 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTTTCGTGACCTAACAGAGGCCTTATGAGCTACACAAAGGGCTGGCTG
Internal bar code:CTACAGCCTGCCCACTACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2051
LEAP-Seq percent confirming:89.1892
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGAAACCAGGCCAAGCAG
Suggested primer 2:CTCGTGTGTGGAGGTCTGAC