Insertion junction: CLIP2.066229_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066229
Chromosome:chromosome 10
Location:3874942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446250 (1 of 1) K13339 - peroxin-6 (PEX6, PXAAA1) 3'UTR
Cre10.g446275 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATCTATAAAGTGTGGCATACGGTGCATGACAATACTGGCACAAACGA
Internal bar code:CTACAGCCTGCCCACTACTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1538
LEAP-Seq percent confirming:92.9825
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTGTGTGGAGGTCTGAC
Suggested primer 2:GTTGAAACCAGGCCAAGCAG