Insertion junction: CLIP2.066238_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066238
Chromosome:chromosome 16
Location:3972219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689700 HPR5 (1 of 1) 1.1.1.272 - D-2-hydroxyacid dehydrogenase (NADP(+)); Hydroxypyruvate reductase 5 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACCGGGTCCGCAGCATCTCCACAATGGTTGGCTCCCGACCCCCGACA
Internal bar code:AGTGACCCGAAACGGACTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5549
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAGCTTTATCCGCTTGC
Suggested primer 2:AGCAAGTTCACTGAGGACCG