Insertion junction: CLIP2.066269_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066269
Chromosome:chromosome 1
Location:7401763
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g052150 ANK2,FAP87 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain; Flagellar Associated Protein 87 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCATGGAATGCTACCATGGCACGTCACACGCGCGCTGAGTGACAGAA
Internal bar code:ACCGGCGTGTAGGACTTCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1568
LEAP-Seq percent confirming:65.5172
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCTCAGTCTGCTCCCCT
Suggested primer 2:CTCCAGCCCCTTCAAGTCTG