Insertion junction: CLIP2.066272_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066272
Chromosome:chromosome 7
Location:3788376
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338550 (1 of 1) IPR002048//IPR006585//IPR006652//IPR008979//IPR011043//IPR011050 - EF-hand domain // Fucolectin tachylectin-4 pentraxin-1 // Kelch repeat type 1 // Galactose-binding domain-like // Galactose oxidase/kelch, beta-propeller // Pectin lyase fold/virulence factor outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGCGATCATGGGAGGCTGAAGCAATGCGGCACAGTCCATGAGATTGA
Internal bar code:GGCCAATTCATGGTTGCTACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4369
LEAP-Seq percent confirming:98.2759
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAACAATAGGCAGCGGCT
Suggested primer 2:GGAGCCGGTGTGATGATAGG