Insertion junction: CLIP2.066278_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066278
Chromosome:chromosome 8
Location:3912696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTCGTCGGCCAGTTTACGGGGCCATCCGCGTCCGTGCCACCCCCATG
Internal bar code:GCCCGGGAACATCCCTAGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2094
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAACCAATAGCTCCACCT
Suggested primer 2:TGGGATCGTAAGTGGTTGGC