Insertion junction: CLIP2.066282_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066282
Chromosome:chromosome 15
Location:1266627
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801726 NCL65 (1 of 3) 6.1.1.9 - Valine--tRNA ligase / Valyl-tRNA synthetase; Nuclear Control of chloroplast-Like 65 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGAGGCGTGGGCTTGCCACTATTGTGAGGTATGAGGTGAGGTGGTTTG
Internal bar code:GAGTGCTGATGAAGAACCTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3707
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGAGGGAGCATGAACAC
Suggested primer 2:ATGCTAGGGTGATGGGGGAT