Insertion junction: CLIP2.066284_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.066284
Chromosome:chromosome 9
Location:472557
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre18.g749197 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGAGGCGGAGGCGAGGAGATGGGGAAGCATGGGTATGAAAAGGCTGA
Internal bar code:AGTAGCGGTAACCCACCATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:232
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATCAACACCCACATAC
Suggested primer 2:AGGAGGAAGGCATCAGGGAT