Insertion junction: CLIP2.066290_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066290
Chromosome:chromosome 12
Location:1878288
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g512100 PIF1 (1 of 1) IPR003593//IPR003840//IPR010285//IPR013785//IPR027417 - AAA+ ATPase domain // DNA helicase // DNA helicase Pif1-like // Aldolase-type TIM barrel // P-loop containing nucleoside triphosphate hydrolase; {"PIF1-related DNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGCTGCTGCAACGGCTGCCGCTGGCGGCCTGGCGGCCGTTGCTGCTG
Internal bar code:CGAGTCTTGTTGATAGTCTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4787
LEAP-Seq percent confirming:2.85714
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGGTGTAATGTAGCAGGT
Suggested primer 2:CTGCAGCGCATCACTTCATC