Insertion junction: CLIP2.066293_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.066293
Chromosome:chromosome 1
Location:5476524
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038750 MOT7 (1 of 1) IPR007024 - BLUF domain; motile cilia related outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTGGGTTGCCCCTTGCATACATGGCTACGGCTTGTCAGAATGTCAGT
Internal bar code:ACTTTAACATGTAAAGTACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4982
LEAP-Seq percent confirming:98.8889
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGAGTGGACAGGGTTAA
Suggested primer 2:CCATGGTGTGTTAGGGCCAT