Insertion junction: CLIP2.066296_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066296
Chromosome:chromosome 1
Location:3736792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g024350 (1 of 2) PTHR10766//PTHR10766:SF49 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACTGTTAGAGCAAGGCGAACCCCGTCCGATGCACGTCTCATGCGGCTT
Internal bar code:GGCGCGGAGGCAGGTTGCTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3205
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACCAGTCCTCCTCGACC
Suggested primer 2:TGAGCTGGTGGTAACGTGTC