Insertion junction: CLIP2.066297_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066297
Chromosome:chromosome 10
Location:1101130
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g425300 (1 of 4) 6.3.5.4 - Asparagine synthase (glutamine-hydrolyzing) / Glutamine-dependent asparagine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCCCGGGCTTCAAGTCTTCACTGAAGGCAGACGGGTCGGGCGCCGCA
Internal bar code:TGTTGAGACCTCACGGTTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:278
LEAP-Seq percent confirming:64.7059
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GAACAGCAGAGAGTGGGACC
Suggested primer 2:GCGTTGTCACCATTGTTGCT