Insertion junction: CLIP2.066303_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.066303
Chromosome:chromosome 16
Location:220905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694750 GT90F30,GT90-30 GT90 family protein 30; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACTTCATCCCTCCTGTCCCCCCTCCTTCCTCTCGTCTCAACTTCTTC
Internal bar code:AGTAATATCAGAGGTGTCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:549
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCCTCCTCCACCCTCTC
Suggested primer 2:TCCAGGTTCGTGATAACGCC