Insertion junction: CLIP2.066306_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066306
Chromosome:chromosome 2
Location:4791463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108900 CAM6 Calmodulin-like protein; (1 of 140) IPR002048 - EF-hand domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACGAACGTATTGTGACCGGTATTGGTGTGGGGGCTGGCGCGTATTAC
Internal bar code:TAAGTTGAGGACACGGGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3753
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGAATTTGCAAGGTGGG
Suggested primer 2:GCTGTTCTGGTTGCAACGAG