Insertion junction: CLIP2.066327_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.066327
Chromosome:chromosome 8
Location:104684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358530 MDE1,OPR113 atpE mRNA stabilization factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCGGAAGAGGGCGGCGTGAGCGATAGCGTGCATTGTGGTAGGTAGAAT
Internal bar code:CTGGGAGATTAGCGGCGGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1081
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTGCTGCTCCTGCTTCT
Suggested primer 2:AGGTGTGTGTGCGTATGTGT