Insertion junction: CLIP2.066328_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.066328
Chromosome:chromosome 12
Location:8993810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g545100 (1 of 274) IPR020683 - Ankyrin repeat-containing domain 5'UTR
Cre12.g545150 (1 of 2) PTHR21514//PTHR21514:SF0 - UNCHARACTERIZED // AP-4 COMPLEX ACCESSORY SUBUNIT TEPSIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTTGCAACGAAGCTTCCATCAGCCGACGTGGCAGGAAAGGTCTCGCAG
Internal bar code:ACCGAACCTAGACTATACTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2700
LEAP-Seq percent confirming:34.6154
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTCAGGAACTCGAATGC
Suggested primer 2:ACCAACAGCAGCAGTACCAA