Insertion junction: CLIP2.066334_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.066334
Chromosome:chromosome 2
Location:5032611
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110950 FAP133,DIC5,D1bIC2WD34 WD-Repeat Intermediate Chain of Dynein 1b; (1 of 2) PTHR12442:SF26 - WD REPEAT-CONTAINING PROTEIN 34 5'UTR
Cre02.g111000 RRA1,CGL9 (1 of 3) PTHR10994//PTHR10994:SF3 - RETICULON // ARABINOSYLTRANSFERASE; Reduced residual arabinose 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCAATCGACATGCGGCCTTGATTGACCAGAGCTCGTTACTCCAATTGC
Internal bar code:AGGATAGATAACGTGGTCTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:6044
LEAP-Seq percent confirming:98.8889
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCACCCTGCAGCCATAA
Suggested primer 2:TACGATGACGCACCAACACA