Insertion junction: CLIP2.066345_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.066345
Chromosome:chromosome 2
Location:2272044
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090150 CAF2,PANC,PAN3,PANC1 (1 of 1) 6.3.2.1 - Pantoate--beta-alanine ligase (AMP-forming) / Pantothenate synthetase; Pantothenate synthetase 3'UTR
Cre02.g800194 (1 of 2) PF14753 - Domain of unknown function (DUF4475) (DUF4475) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGGGCGGCTGGCTACAATGGTCAGTGGCAGTGGCTAGCACAGGCTCT
Internal bar code:GCTGCAAAGACTGAAACCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:662
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGAGAGGTTGGAGCTTG
Suggested primer 2:GAAGGGGGTTAAGGGTTGGG